Decadent Blackberry Lime Cupcakes

Category: Sweet Endings

These Blackberry Lime Cheesecake Cupcakes combine a buttery graham cracker crust with a smooth, tangy cream cheese filling infused with fresh lime juice. Each cupcake features a delightful blackberry jam center that adds sweetness and color. After baking until just set, they're topped with freshly whipped cream, fresh blackberries, and lime zest for a stunning presentation. The contrast between tart lime and sweet blackberry creates a perfectly balanced dessert that needs at least 2 hours of chilling to develop its full flavor profile. These individual-sized treats are ideal for parties, special occasions, or whenever you crave a sophisticated dessert.

A woman in a chef's outfit poses for a picture.
Updated on Thu, 08 May 2025 17:42:58 GMT
A cupcake with a blackberry and lime on top. Pin
A cupcake with a blackberry and lime on top. | applefoodie.com

This blackberry lime cheesecake cupcake recipe combines the perfect balance of tangy lime and sweet blackberries in a creamy cheesecake base. The graham cracker crust provides a delightful crunch that complements the smooth filling, making these cupcakes an impressive dessert for any occasion.

I first made these cupcakes for my sister's bridal shower and they were such a hit that they've become my signature dessert for gatherings. The contrast between the purple blackberries and green lime zest never fails to impress guests.

Ingredients

  • Graham cracker crumbs: Create the perfect buttery base for these cheesecake cupcakes
  • Cream cheese: Must be fully softened to room temperature for the smoothest texture
  • Fresh lime juice: Adds brightness that bottled juice simply cannot match
  • Blackberry jam: Creates a beautiful swirl and concentrated flavor throughout
  • Fresh blackberries: Provide bursts of juicy flavor and stunning visual appeal
  • Heavy cream: Whipped to stiff peaks creates a light cloud-like topping
  • Lime zest: Brings color and concentrated citrus aroma to finish the cupcakes

Step-by-Step Instructions

Prepare the crust:
Mix graham cracker crumbs with melted butter until the mixture resembles wet sand. Press about one tablespoon firmly into each cupcake liner using the back of a measuring spoon to create an even layer. The crust should be compact to prevent crumbling when serving.
Create the filling:
Beat softened cream cheese and sugar until completely smooth and no lumps remain about 2-3 minutes. Add eggs one at a time allowing each to fully incorporate before adding the next. This method prevents air bubbles from forming in your batter. Stir in vanilla extract and fresh lime juice until just combined being careful not to overmix.
Assemble the cupcakes:
Spoon a tablespoon of blackberry jam onto each crust spreading it slightly but not all the way to the edges. Pour the cream cheese mixture over the jam filling each liner about three-quarters full. The batter will rise slightly during baking.
Bake to perfection:
Place the cupcakes in a preheated oven and bake for 20-25 minutes until the centers are just set but still slightly jiggly. The tops should not brown significantly. Remove from oven and allow to cool completely at room temperature before chilling.
Finish with toppings:
Whip heavy cream to stiff peaks using chilled beaters and bowl for best results. Dollop or pipe the cream onto each cooled cupcake. Arrange fresh blackberries on top and sprinkle with lime zest just before serving for maximum visual impact.
A cupcake with a blackberry and lime on top. Pin
A cupcake with a blackberry and lime on top. | applefoodie.com

The secret to these cupcakes is in the balance of flavors. I discovered that adding the lime juice directly to the cream cheese mixture rather than as a separate layer creates a more harmonious flavor profile. My family particularly loves the hidden jam layer that creates a wonderful surprise with each bite.

Storage Tips

These cheesecake cupcakes can be stored in an airtight container in the refrigerator for up to 3 days. For the best presentation wait to add the fresh berries and lime zest until just before serving. The whipped cream topping will hold its shape nicely in the refrigerator thanks to the stabilizing effect of being placed on the dense cheesecake base.

Make Ahead Options

You can prepare these cupcakes completely up to 48 hours in advance making them perfect for entertaining. The flavors actually develop and improve with time as the lime and blackberry notes meld together. If freezing wrap individual unfrosted cupcakes tightly in plastic wrap then foil and freeze for up to one month. Thaw overnight in the refrigerator before topping and serving.

Flavor Variations

The blackberry lime combination is divine but this versatile recipe works wonderfully with other fruit pairings. Try raspberry lemon for a classic combination or blueberry orange for something unexpected. You can also add a tablespoon of liqueur that complements your fruit choice to the cream cheese mixture for an adult version perfect for dinner parties.

A cupcake with blackberry and lime toppings. Pin
A cupcake with blackberry and lime toppings. | applefoodie.com

Frequently Asked Questions About the Recipe

→ Can I make these cheesecake cupcakes ahead of time?

Yes! These cupcakes are actually perfect for making ahead. They can be prepared up to 2 days in advance and kept refrigerated. Just add the whipped cream topping and garnishes shortly before serving for the best presentation and texture.

→ How do I know when the cheesecake cupcakes are properly baked?

The cupcakes are done when the centers are just set but still have a slight jiggle. They should not be completely firm when you remove them from the oven as they will continue to set while cooling. Overbaking can cause cracks and a dry texture.

→ Can I freeze these blackberry lime cheesecake cupcakes?

Yes, you can freeze them for up to 1 month. Freeze them without the whipped cream topping and garnishes. Wrap each cooled cupcake individually in plastic wrap, then place in a freezer-safe container. Thaw overnight in the refrigerator and add fresh toppings before serving.

→ What can I use instead of graham crackers for the crust?

Digestive biscuits make an excellent substitute for graham crackers. You could also use shortbread cookies, vanilla wafers, or gingersnaps for a different flavor profile. For a more tropical twist, try using crushed lime cookies to enhance the lime flavor.

→ Can I use frozen blackberries instead of fresh?

Yes, frozen blackberries can work for the jam component. Thaw and drain them well before using to avoid excess moisture. For the garnish, fresh berries are recommended for the best appearance and texture, but in a pinch, thawed frozen berries can work too.

→ How do I prevent my cheesecake cupcakes from cracking?

To prevent cracks, avoid overmixing the batter which incorporates too much air. Bake at a moderate temperature (325°F is perfect) and don't overbake. Some bakers also recommend placing a shallow pan of water on the rack below the cupcakes to create moisture in the oven.

Blackberry Lime Cheesecake Cupcakes

Luscious cheesecake cupcakes combining tart lime and sweet blackberries on a buttery graham cracker crust topped with fresh berries.

Preparation Time
20 min
Cook Time
25 min
Total Time
45 min
By: Ava

Category: Desserts

Skill Level: Intermediate

Cuisine: American

Yield: 12 Serves

Dietary Preferences: Vegetarian

Ingredients

→ Crust

01 1 cup graham cracker crumbs
02 1/4 cup melted butter

→ Filling

03 16 oz cream cheese, softened
04 1/2 cup granulated sugar
05 2 large eggs
06 1 tsp vanilla extract
07 1/4 cup fresh lime juice

→ Topping

08 1/2 cup blackberry jam
09 1/2 cup fresh blackberries
10 1/2 cup heavy cream
11 Zest of 1 lime (for garnish)
12 Extra blackberries and lime zest for garnish

Steps

Step 01

Preheat your oven to 325°F (160°C). Line a muffin tin with cupcake liners.

Step 02

In a small bowl, combine the graham cracker crumbs and melted butter. Press the mixture into the bottom of each cupcake liner to form a crust.

Step 03

In a large mixing bowl, beat the cream cheese and sugar together until smooth. Add the eggs one at a time, beating after each addition. Stir in the vanilla extract and lime juice.

Step 04

Spoon a tablespoon of blackberry jam onto each crust, then fill the cupcake liners with the cream cheese mixture.

Step 05

Bake for 20-25 minutes, or until the center is just set. Let the cupcakes cool completely.

Step 06

In a medium bowl, whip the heavy cream until stiff peaks form. Spread the whipped cream over the cooled cupcakes.

Step 07

Top each cupcake with fresh blackberries, extra blackberry jam, and lime zest for garnish.

Step 08

Chill the cupcakes for at least 2 hours before serving to allow the flavors to meld together.

Notes & Tips

  1. Ensure that your cream cheese is softened at room temperature to avoid lumps in the mixture.
  2. Chill the cupcakes for at least 2 hours to set the cheesecake filling and enhance flavor.
  3. When zesting the lime, avoid grating too deeply into the bitter pith layer.

Necessary Equipment

  • Muffin tin
  • Cupcake liners
  • Mixing bowls
  • Electric hand or stand mixer

Allergy Information

Always double-check ingredient labels for allergens and consult a healthcare professional if you’re unsure.
  • Contains dairy (cream cheese, heavy cream)
  • Contains gluten (graham cracker crumbs)
  • Contains eggs

Nutritional Facts (Per Serving)

These details are for informational purposes and should not be considered medical advice.
  • Calories: ~
  • Fats: ~
  • Carbohydrates: ~
  • Proteins: ~